Add to user's Personal store:
certutil -user -addstore My %filename.cer"
Add to machine's Personal store (so it is common to all users):
certutil -addstore My %filename.cer"
Add to Trusted Root Certificate Authorities for all users:
certutil -addstore Root %filename.cer"
Add to Intermediate Certificate Authorities for all users:
certutil -addstore CA %filename.cer"
Add to user's Enterprise Trust store, typically used for the root certificate (in addition to normal trusted root store) for CAs that issue smartcard logon certificates:
certutil -user -enterprise -addstore Trust %filename.cer%
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